Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 ACE3P-201ENST00000423435 1973 ntBASIC16.66■□□□□ 0.26
LMO3Q8TAP4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 AJ011931.1-201ENST00000618749 2492 ntBASIC16.66■□□□□ 0.26
LMO3Q8TAP4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 AL359258.3-201ENST00000622910 2331 ntBASIC16.66■□□□□ 0.26
LMO3Q8TAP4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO3Q8TAP4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 MIR661-201ENST00000384842 89 ntBASIC16.65■□□□□ 0.26
LMO3Q8TAP4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 SPTLC1P1-201ENST00000447199 261 ntBASIC16.65■□□□□ 0.26
LMO3Q8TAP4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 AC011467.4-201ENST00000594891 528 ntBASIC16.65■□□□□ 0.26
LMO3Q8TAP4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LMO3Q8TAP4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LMO3Q8TAP4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LMO3Q8TAP4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
LMO3Q8TAP4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 DRD5P1-201ENST00000456605 1438 ntBASIC16.64■□□□□ 0.25
LMO3Q8TAP4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms