Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00311Q8N616 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00311Q8N616 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00311Q8N616 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LINC00311Q8N616 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00311Q8N616 RRP7BP-205ENST00000566851 833 ntBASIC12.64□□□□□ -0.39
LINC00311Q8N616 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.64□□□□□ -0.39
LINC00311Q8N616 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00311Q8N616 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00311Q8N616 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC00311Q8N616 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00311Q8N616 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00311Q8N616 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
LINC00311Q8N616 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00311Q8N616 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 AC068587.6-202ENST00000641839 5619 ntBASIC12.63□□□□□ -0.39
LINC00311Q8N616 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 SPDYE18-201ENST00000510091 1050 ntBASIC12.63□□□□□ -0.39
LINC00311Q8N616 DOC2GP-202ENST00000514950 1163 ntBASIC12.63□□□□□ -0.39
LINC00311Q8N616 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.63□□□□□ -0.39
LINC00311Q8N616 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.63□□□□□ -0.39
LINC00311Q8N616 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.63□□□□□ -0.39
LINC00311Q8N616 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.63□□□□□ -0.39
LINC00311Q8N616 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC00311Q8N616 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00311Q8N616 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms