Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 AL359711.2-201ENST00000563105 872 ntBASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 AL596325.1-201ENST00000563991 1082 ntBASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 AC124283.3-201ENST00000570869 594 ntBASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 AC107373.2-201ENST00000607735 490 ntBASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 AC136621.1-201ENST00000624017 2304 ntBASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 C1QBPP1-201ENST00000400117 770 ntBASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 SOCS2P1-201ENST00000417727 557 ntBASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 AC093813.1-201ENST00000605066 256 ntBASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAM1L1Q8N609 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 AC132872.4-202ENST00000622924 2756 ntBASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAM1L1Q8N609 AL162726.2-201ENST00000438986 1017 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms