Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 AL133267.1-201ENST00000398220 340 ntBASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 CR383656.12-201ENST00000549567 513 ntBASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 RARRES2P5-201ENST00000564013 466 ntBASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 AC015910.1-201ENST00000579400 975 ntBASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 MIR6752-201ENST00000618442 71 ntBASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AC013268.4-201ENST00000637413 2228 ntBASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AC012497.1-201ENST00000429392 575 ntBASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 KRT18P43-201ENST00000469825 1281 ntBASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCUBE3Q8IX30 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 TMBIM7P-203ENST00000641617 1718 ntBASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 SLC7A15P-201ENST00000424028 1363 ntBASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCUBE3Q8IX30 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms