Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC008761.3-201ENST00000624803 892 ntBASIC10.46□□□□□ -0.73
SCXQ7RTU7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
SCXQ7RTU7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
SCXQ7RTU7 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
SCXQ7RTU7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC10.46□□□□□ -0.74
SCXQ7RTU7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
SCXQ7RTU7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
SCXQ7RTU7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
SCXQ7RTU7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
SCXQ7RTU7 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SCXQ7RTU7 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
SCXQ7RTU7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SCXQ7RTU7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SCXQ7RTU7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC10.46□□□□□ -0.74
SCXQ7RTU7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC10.46□□□□□ -0.74
SCXQ7RTU7 AL671710.1-201ENST00000610245 2349 ntBASIC10.46□□□□□ -0.74
SCXQ7RTU7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SCXQ7RTU7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SCXQ7RTU7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
SCXQ7RTU7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC10.46□□□□□ -0.74
SCXQ7RTU7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
SCXQ7RTU7 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SCXQ7RTU7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SCXQ7RTU7 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.45□□□□□ -0.74
SCXQ7RTU7 AC006277.1-201ENST00000624348 1610 ntBASIC10.45□□□□□ -0.74
SCXQ7RTU7 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 AL353705.2-201ENST00000428243 662 ntBASIC10.45□□□□□ -0.74
SCXQ7RTU7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 AC007967.4-201ENST00000614700 386 ntBASIC10.45□□□□□ -0.74
SCXQ7RTU7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 AP003680.1-201ENST00000598970 3660 ntBASIC10.45□□□□□ -0.74
SCXQ7RTU7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 TCAF2P1-201ENST00000291129 2421 ntBASIC10.45□□□□□ -0.74
SCXQ7RTU7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SCXQ7RTU7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC10.45□□□□□ -0.74
SCXQ7RTU7 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SCXQ7RTU7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SCXQ7RTU7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SCXQ7RTU7 AC073439.1-201ENST00000624121 1774 ntBASIC10.44□□□□□ -0.74
SCXQ7RTU7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SCXQ7RTU7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC10.44□□□□□ -0.74
SCXQ7RTU7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SCXQ7RTU7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC10.44□□□□□ -0.74
SCXQ7RTU7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SCXQ7RTU7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SCXQ7RTU7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
SCXQ7RTU7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SCXQ7RTU7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms