Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDZRN4Q6ZMN7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDZRN4Q6ZMN7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.11■□□□□ 0.49
PDZRN4Q6ZMN7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC18.11■□□□□ 0.49
PDZRN4Q6ZMN7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDZRN4Q6ZMN7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDZRN4Q6ZMN7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 AC091951.1-201ENST00000512854 2465 ntBASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 AL355306.1-201ENST00000415580 579 ntBASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 FAM86C2P-203ENST00000528684 1004 ntBASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PDZRN4Q6ZMN7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 PTENP1-202ENST00000532280 3996 ntBASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 MIR648-201ENST00000385046 94 ntBASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZRN4Q6ZMN7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PDZRN4Q6ZMN7 MROH4P-201ENST00000431302 1578 ntBASIC18.08■□□□□ 0.49
PDZRN4Q6ZMN7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
PDZRN4Q6ZMN7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDZRN4Q6ZMN7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PDZRN4Q6ZMN7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.08■□□□□ 0.49
PDZRN4Q6ZMN7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDZRN4Q6ZMN7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDZRN4Q6ZMN7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDZRN4Q6ZMN7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.08■□□□□ 0.48
PDZRN4Q6ZMN7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.08■□□□□ 0.48
PDZRN4Q6ZMN7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDZRN4Q6ZMN7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDZRN4Q6ZMN7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDZRN4Q6ZMN7 HMGA1P7-201ENST00000406908 502 ntBASIC18.08■□□□□ 0.48
PDZRN4Q6ZMN7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.08■□□□□ 0.48
PDZRN4Q6ZMN7 AL671277.1-201ENST00000429656 993 ntBASIC18.08■□□□□ 0.48
PDZRN4Q6ZMN7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.08■□□□□ 0.48
PDZRN4Q6ZMN7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.08■□□□□ 0.48
PDZRN4Q6ZMN7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms