Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 WASH3P-207ENST00000560956 1394 ntBASIC14.8□□□□□ -0.04
LPCAT4Q643R3 FO538757.1-201ENST00000623083 1397 ntBASIC14.8□□□□□ -0.04
LPCAT4Q643R3 AC016734.2-201ENST00000624325 1377 ntBASIC14.8□□□□□ -0.04
LPCAT4Q643R3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 AC105206.1-202ENST00000314927 2368 ntBASIC14.8□□□□□ -0.04
LPCAT4Q643R3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.79□□□□□ -0.04
LPCAT4Q643R3 KRT18P1-202ENST00000452408 1331 ntBASIC14.79□□□□□ -0.04
LPCAT4Q643R3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 AP002469.2-201ENST00000531724 424 ntBASIC14.79□□□□□ -0.04
LPCAT4Q643R3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 AP001269.4-201ENST00000609611 512 ntBASIC14.79□□□□□ -0.04
LPCAT4Q643R3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 AC004706.3-202ENST00000621574 984 ntBASIC14.79□□□□□ -0.04
LPCAT4Q643R3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 Z82170.1-201ENST00000625081 3192 ntBASIC14.79□□□□□ -0.04
LPCAT4Q643R3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LPCAT4Q643R3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 AC126335.2-201ENST00000623362 4637 ntBASIC14.78□□□□□ -0.04
LPCAT4Q643R3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 TOB2P1-201ENST00000469761 992 ntBASIC14.78□□□□□ -0.04
LPCAT4Q643R3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 AC139887.3-201ENST00000568585 713 ntBASIC14.78□□□□□ -0.04
LPCAT4Q643R3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LPCAT4Q643R3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms