Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 NFIC-211ENST00000641145 8399 ntBASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 FLJ38576-201ENST00000623820 2459 ntBASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 NKAIN1P1-201ENST00000435754 582 ntBASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 MPRIPP1-201ENST00000452433 1089 ntBASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 CHMP4BP1-201ENST00000556017 588 ntBASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 RN7SL713P-201ENST00000582127 302 ntBASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 OR10B1P-201ENST00000601666 907 ntBASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 ZACNP1-201ENST00000612259 710 ntBASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 AP001505.2-201ENST00000616815 443 ntBASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 MIR6727-201ENST00000620702 65 ntBASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD4Q5XG99 KRT8P14-201ENST00000414254 1442 ntBASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 RN7SL720P-201ENST00000488178 304 ntBASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 IMP3P2-201ENST00000489760 475 ntBASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD4Q5XG99 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms