Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 AC011471.3-201ENST00000623576 402 ntBASIC19.23■□□□□ 0.67
R3HDM1Q15032 AC002472.3-201ENST00000640124 621 ntBASIC19.23■□□□□ 0.67
R3HDM1Q15032 AL645728.2-202ENST00000641679 227 ntBASIC19.23■□□□□ 0.67
R3HDM1Q15032 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.23■□□□□ 0.67
R3HDM1Q15032 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HDM1Q15032 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.23■□□□□ 0.67
R3HDM1Q15032 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.23■□□□□ 0.67
R3HDM1Q15032 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HDM1Q15032 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HDM1Q15032 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HDM1Q15032 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HDM1Q15032 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
R3HDM1Q15032 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
R3HDM1Q15032 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.22■□□□□ 0.67
R3HDM1Q15032 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 AC015909.3-201ENST00000572855 1794 ntBASIC19.22■□□□□ 0.67
R3HDM1Q15032 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 AC136759.1-202ENST00000530858 2194 ntBASIC19.22■□□□□ 0.67
R3HDM1Q15032 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
R3HDM1Q15032 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
R3HDM1Q15032 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 AL807761.2-201ENST00000422849 729 ntBASIC19.22■□□□□ 0.67
R3HDM1Q15032 AC078875.1-201ENST00000431907 724 ntBASIC19.22■□□□□ 0.67
R3HDM1Q15032 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
R3HDM1Q15032 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC19.22■□□□□ 0.67
R3HDM1Q15032 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC19.22■□□□□ 0.67
R3HDM1Q15032 AL157813.1-201ENST00000612996 587 ntBASIC19.22■□□□□ 0.67
R3HDM1Q15032 AP001184.1-201ENST00000637936 376 ntBASIC19.22■□□□□ 0.67
R3HDM1Q15032 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
R3HDM1Q15032 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.22■□□□□ 0.67
R3HDM1Q15032 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.22■□□□□ 0.67
R3HDM1Q15032 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 AL008718.2-201ENST00000609206 1313 ntBASIC19.22■□□□□ 0.67
R3HDM1Q15032 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM1Q15032 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
R3HDM1Q15032 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 NCR3-202ENST00000376071 541 ntTSL 5 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 HLA-DPA2-205ENST00000433582 733 ntBASIC19.21■□□□□ 0.67
R3HDM1Q15032 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 HNRNPA1P42-201ENST00000458678 957 ntBASIC19.21■□□□□ 0.67
R3HDM1Q15032 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 PGAM1P12-201ENST00000505622 748 ntBASIC19.21■□□□□ 0.67
R3HDM1Q15032 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 AP005212.2-201ENST00000584979 510 ntBASIC19.21■□□□□ 0.67
R3HDM1Q15032 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM1Q15032 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 STK26-204ENST00000481105 1835 ntTSL 2 BASIC19.21■□□□□ 0.67
R3HDM1Q15032 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 AP000593.2-201ENST00000542775 1433 ntBASIC19.2■□□□□ 0.66
R3HDM1Q15032 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.2■□□□□ 0.66
R3HDM1Q15032 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM1Q15032 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms