Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CACNA1BQ00975 HLF-202ENST00000430986 1385 ntTSL 2 BASIC14.26□□□□□ -0.13
CACNA1BQ00975 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CACNA1BQ00975 HIST2H2BA-201ENST00000412169 381 ntBASIC14.26□□□□□ -0.13
CACNA1BQ00975 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.26□□□□□ -0.13
CACNA1BQ00975 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.26□□□□□ -0.13
CACNA1BQ00975 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.26□□□□□ -0.13
CACNA1BQ00975 MIR4313-201ENST00000580760 101 ntBASIC14.26□□□□□ -0.13
CACNA1BQ00975 AC020922.4-201ENST00000621389 339 ntBASIC14.26□□□□□ -0.13
CACNA1BQ00975 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CACNA1BQ00975 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
CACNA1BQ00975 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CACNA1BQ00975 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CACNA1BQ00975 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.26□□□□□ -0.13
CACNA1BQ00975 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CACNA1BQ00975 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 OR3A1-202ENST00000615105 966 ntBASIC14.25□□□□□ -0.13
CACNA1BQ00975 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 AC090502.4-201ENST00000551714 1386 ntBASIC14.25□□□□□ -0.13
CACNA1BQ00975 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 GHSR-202ENST00000427970 912 ntBASIC14.25□□□□□ -0.13
CACNA1BQ00975 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.25□□□□□ -0.13
CACNA1BQ00975 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CACNA1BQ00975 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 RCC2P8-201ENST00000502779 1035 ntBASIC14.24□□□□□ -0.13
CACNA1BQ00975 AL391280.1-201ENST00000506969 1062 ntBASIC14.24□□□□□ -0.13
CACNA1BQ00975 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 RN7SL470P-201ENST00000583069 259 ntBASIC14.24□□□□□ -0.13
CACNA1BQ00975 AL451007.2-201ENST00000632004 563 ntBASIC14.24□□□□□ -0.13
CACNA1BQ00975 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.24□□□□□ -0.13
CACNA1BQ00975 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.24□□□□□ -0.13
CACNA1BQ00975 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 AC009053.2-201ENST00000563701 2365 ntBASIC14.24□□□□□ -0.13
CACNA1BQ00975 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CACNA1BQ00975 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms