Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
IRX3P78415 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.24■□□□□ 0.51
IRX3P78415 AC245100.3-201ENST00000441281 285 ntBASIC18.24■□□□□ 0.51
IRX3P78415 YBX1P6-201ENST00000442962 1002 ntBASIC18.24■□□□□ 0.51
IRX3P78415 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.24■□□□□ 0.51
IRX3P78415 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.24■□□□□ 0.51
IRX3P78415 AC005252.2-201ENST00000624630 1141 ntBASIC18.24■□□□□ 0.51
IRX3P78415 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.24■□□□□ 0.51
IRX3P78415 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
IRX3P78415 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.24■□□□□ 0.51
IRX3P78415 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.24■□□□□ 0.51
IRX3P78415 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.24■□□□□ 0.51
IRX3P78415 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.24■□□□□ 0.51
IRX3P78415 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.24■□□□□ 0.51
IRX3P78415 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
IRX3P78415 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.23■□□□□ 0.51
IRX3P78415 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.23■□□□□ 0.51
IRX3P78415 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.23■□□□□ 0.51
IRX3P78415 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.23■□□□□ 0.51
IRX3P78415 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.23■□□□□ 0.51
IRX3P78415 AC093433.1-201ENST00000458048 571 ntBASIC18.23■□□□□ 0.51
IRX3P78415 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.23■□□□□ 0.51
IRX3P78415 KRT18P43-201ENST00000469825 1281 ntBASIC18.23■□□□□ 0.51
IRX3P78415 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
IRX3P78415 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
IRX3P78415 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.23■□□□□ 0.51
IRX3P78415 AC079316.1-201ENST00000548397 411 ntBASIC18.23■□□□□ 0.51
IRX3P78415 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.23■□□□□ 0.51
IRX3P78415 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.23■□□□□ 0.51
IRX3P78415 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.23■□□□□ 0.51
IRX3P78415 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
IRX3P78415 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.23■□□□□ 0.51
IRX3P78415 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.23■□□□□ 0.51
IRX3P78415 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
IRX3P78415 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
IRX3P78415 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 MSTO2P-201ENST00000314835 1709 ntBASIC18.23■□□□□ 0.51
IRX3P78415 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
IRX3P78415 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
IRX3P78415 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX3P78415 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.22■□□□□ 0.51
IRX3P78415 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.22■□□□□ 0.51
IRX3P78415 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.22■□□□□ 0.51
IRX3P78415 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.22■□□□□ 0.51
IRX3P78415 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.22■□□□□ 0.51
IRX3P78415 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.22■□□□□ 0.51
IRX3P78415 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
IRX3P78415 AC020907.1-201ENST00000616460 1350 ntBASIC18.22■□□□□ 0.51
IRX3P78415 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.22■□□□□ 0.51
IRX3P78415 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.22■□□□□ 0.51
IRX3P78415 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.22■□□□□ 0.51
IRX3P78415 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
IRX3P78415 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
IRX3P78415 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
IRX3P78415 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
IRX3P78415 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.22■□□□□ 0.51
IRX3P78415 AC106760.1-201ENST00000508690 800 ntBASIC18.22■□□□□ 0.51
IRX3P78415 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.22■□□□□ 0.51
IRX3P78415 AC010328.2-201ENST00000597698 1111 ntBASIC18.22■□□□□ 0.51
IRX3P78415 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.22■□□□□ 0.51
IRX3P78415 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms