Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.64□□□□□ -0.55
CMC4P56277 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
CMC4P56277 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 AL121723.1-201ENST00000445194 1519 ntBASIC11.64□□□□□ -0.55
CMC4P56277 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.64□□□□□ -0.55
CMC4P56277 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.64□□□□□ -0.55
CMC4P56277 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.64□□□□□ -0.55
CMC4P56277 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.64□□□□□ -0.55
CMC4P56277 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
CMC4P56277 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.63□□□□□ -0.55
CMC4P56277 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CMC4P56277 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CMC4P56277 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 AC098614.1-201ENST00000368528 745 ntBASIC11.63□□□□□ -0.55
CMC4P56277 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.63□□□□□ -0.55
CMC4P56277 NUS1P3-201ENST00000423502 862 ntBASIC11.63□□□□□ -0.55
CMC4P56277 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.63□□□□□ -0.55
CMC4P56277 FAM86LP-201ENST00000478302 853 ntBASIC11.63□□□□□ -0.55
CMC4P56277 AC011495.1-201ENST00000498085 584 ntBASIC11.63□□□□□ -0.55
CMC4P56277 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.63□□□□□ -0.55
CMC4P56277 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.63□□□□□ -0.55
CMC4P56277 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
CMC4P56277 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
CMC4P56277 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 AC140912.1-201ENST00000577171 1054 ntBASIC11.63□□□□□ -0.55
CMC4P56277 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
CMC4P56277 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 AL132655.2-201ENST00000596276 594 ntBASIC11.63□□□□□ -0.55
CMC4P56277 AC093813.1-201ENST00000605066 256 ntBASIC11.63□□□□□ -0.55
CMC4P56277 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.63□□□□□ -0.55
CMC4P56277 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.63□□□□□ -0.55
CMC4P56277 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.63□□□□□ -0.55
CMC4P56277 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 AC018892.3-201ENST00000623986 2499 ntBASIC11.63□□□□□ -0.55
CMC4P56277 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CMC4P56277 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.63□□□□□ -0.55
CMC4P56277 AC127383.1-201ENST00000444697 1800 ntBASIC11.63□□□□□ -0.55
CMC4P56277 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.63□□□□□ -0.55
CMC4P56277 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CMC4P56277 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CMC4P56277 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.62□□□□□ -0.55
CMC4P56277 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.62□□□□□ -0.55
CMC4P56277 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
CMC4P56277 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.62□□□□□ -0.55
CMC4P56277 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms