Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 PPT1-215ENST00000641471 2368 ntBASIC16.64■□□□□ 0.25
CDH8P55286 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
CDH8P55286 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH8P55286 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.64■□□□□ 0.25
CDH8P55286 AC104596.2-201ENST00000512793 793 ntBASIC16.64■□□□□ 0.25
CDH8P55286 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH8P55286 AC092552.1-201ENST00000547243 906 ntBASIC16.64■□□□□ 0.25
CDH8P55286 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.64■□□□□ 0.25
CDH8P55286 AC025181.2-201ENST00000606994 802 ntBASIC16.64■□□□□ 0.25
CDH8P55286 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH8P55286 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH8P55286 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.64■□□□□ 0.25
CDH8P55286 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH8P55286 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDH8P55286 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDH8P55286 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CDH8P55286 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH8P55286 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDH8P55286 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH8P55286 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDH8P55286 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDH8P55286 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH8P55286 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH8P55286 VDAC1P7-201ENST00000462417 847 ntBASIC16.63■□□□□ 0.25
CDH8P55286 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH8P55286 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CDH8P55286 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.63■□□□□ 0.25
CDH8P55286 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.63■□□□□ 0.25
CDH8P55286 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH8P55286 AL049840.4-201ENST00000602422 811 ntBASIC16.63■□□□□ 0.25
CDH8P55286 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH8P55286 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDH8P55286 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH8P55286 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDH8P55286 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH8P55286 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 AC112693.3-201ENST00000624819 1983 ntBASIC16.62■□□□□ 0.25
CDH8P55286 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDH8P55286 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CDH8P55286 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDH8P55286 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH8P55286 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CDH8P55286 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDH8P55286 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH8P55286 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.62■□□□□ 0.25
CDH8P55286 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH8P55286 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.62■□□□□ 0.25
CDH8P55286 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.62■□□□□ 0.25
CDH8P55286 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms