Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.07■□□□□ 0.16
ATXN3P54252 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.07■□□□□ 0.16
ATXN3P54252 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.07■□□□□ 0.16
ATXN3P54252 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ATXN3P54252 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.07■□□□□ 0.16
ATXN3P54252 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.07■□□□□ 0.16
ATXN3P54252 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ATXN3P54252 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 AL603832.2-201ENST00000566195 2125 ntBASIC16.07■□□□□ 0.16
ATXN3P54252 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
ATXN3P54252 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.07■□□□□ 0.16
ATXN3P54252 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ATXN3P54252 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
ATXN3P54252 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.06■□□□□ 0.16
ATXN3P54252 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ATXN3P54252 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.06■□□□□ 0.16
ATXN3P54252 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATXN3P54252 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATXN3P54252 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATXN3P54252 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.06■□□□□ 0.16
ATXN3P54252 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.06■□□□□ 0.16
ATXN3P54252 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.06■□□□□ 0.16
ATXN3P54252 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATXN3P54252 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.06■□□□□ 0.16
ATXN3P54252 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.06■□□□□ 0.16
ATXN3P54252 SRD5A3P1-201ENST00000603021 949 ntBASIC16.06■□□□□ 0.16
ATXN3P54252 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.06■□□□□ 0.16
ATXN3P54252 MIR6069-201ENST00000620069 79 ntBASIC16.06■□□□□ 0.16
ATXN3P54252 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.06■□□□□ 0.16
ATXN3P54252 AL033527.5-202ENST00000641632 1098 ntBASIC16.06■□□□□ 0.16
ATXN3P54252 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ATXN3P54252 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATXN3P54252 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.06■□□□□ 0.16
ATXN3P54252 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.06■□□□□ 0.16
ATXN3P54252 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
ATXN3P54252 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATXN3P54252 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATXN3P54252 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.06■□□□□ 0.16
ATXN3P54252 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.05■□□□□ 0.16
ATXN3P54252 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
ATXN3P54252 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ATXN3P54252 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.05■□□□□ 0.16
ATXN3P54252 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ATXN3P54252 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.05■□□□□ 0.16
ATXN3P54252 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.05■□□□□ 0.16
ATXN3P54252 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATXN3P54252 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.05■□□□□ 0.16
ATXN3P54252 KRT223P-202ENST00000449164 1292 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms