Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
MTHFRP42898 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.33■□□□□ 0.2
MTHFRP42898 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 AC092171.3-201ENST00000610122 2651 ntBASIC16.32■□□□□ 0.2
MTHFRP42898 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MTHFRP42898 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
MTHFRP42898 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.32■□□□□ 0.2
MTHFRP42898 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
MTHFRP42898 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
MTHFRP42898 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
MTHFRP42898 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.32■□□□□ 0.2
MTHFRP42898 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.32■□□□□ 0.2
MTHFRP42898 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
MTHFRP42898 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
MTHFRP42898 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.32■□□□□ 0.2
MTHFRP42898 AP006547.1-201ENST00000563435 692 ntBASIC16.32■□□□□ 0.2
MTHFRP42898 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.32■□□□□ 0.2
MTHFRP42898 MIR4741-201ENST00000579822 90 ntBASIC16.32■□□□□ 0.2
MTHFRP42898 AC020914.3-201ENST00000594712 304 ntBASIC16.32■□□□□ 0.2
MTHFRP42898 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
MTHFRP42898 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 AC026691.1-201ENST00000602502 2017 ntBASIC16.32■□□□□ 0.2
MTHFRP42898 AC097359.3-201ENST00000603982 1210 ntBASIC16.32■□□□□ 0.2
MTHFRP42898 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.32■□□□□ 0.2
MTHFRP42898 AC006449.5-201ENST00000610658 2098 ntBASIC16.32■□□□□ 0.2
MTHFRP42898 AC005695.3-201ENST00000614522 232 ntBASIC16.32■□□□□ 0.2
MTHFRP42898 AC145423.3-201ENST00000615987 467 ntBASIC16.32■□□□□ 0.2
MTHFRP42898 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
MTHFRP42898 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MTHFRP42898 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.31■□□□□ 0.2
MTHFRP42898 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 AC078925.2-201ENST00000624013 1973 ntBASIC16.31■□□□□ 0.2
MTHFRP42898 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.31■□□□□ 0.2
MTHFRP42898 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.31■□□□□ 0.2
MTHFRP42898 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.31■□□□□ 0.2
MTHFRP42898 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
MTHFRP42898 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.31■□□□□ 0.2
MTHFRP42898 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MTHFRP42898 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.31■□□□□ 0.2
MTHFRP42898 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.31■□□□□ 0.2
MTHFRP42898 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MTHFRP42898 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.31■□□□□ 0.2
MTHFRP42898 HOMER2P2-201ENST00000451621 847 ntBASIC16.31■□□□□ 0.2
MTHFRP42898 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.31■□□□□ 0.2
MTHFRP42898 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.31■□□□□ 0.2
MTHFRP42898 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.31■□□□□ 0.2
MTHFRP42898 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.31■□□□□ 0.2
MTHFRP42898 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.31■□□□□ 0.2
MTHFRP42898 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
MTHFRP42898 AC104982.3-201ENST00000581995 514 ntBASIC16.31■□□□□ 0.2
MTHFRP42898 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.31■□□□□ 0.2
MTHFRP42898 EEF1DP1-201ENST00000585891 896 ntBASIC16.31■□□□□ 0.2
MTHFRP42898 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MTHFRP42898 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.31■□□□□ 0.2
MTHFRP42898 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
MTHFRP42898 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.31■□□□□ 0.2
MTHFRP42898 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.31■□□□□ 0.2
MTHFRP42898 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MTHFRP42898 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.31■□□□□ 0.2
MTHFRP42898 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.31■□□□□ 0.2
MTHFRP42898 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms