Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RFC4P35249 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.4■□□□□ 0.7
RFC4P35249 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.4■□□□□ 0.7
RFC4P35249 AC011742.3-201ENST00000439053 820 ntBASIC19.4■□□□□ 0.7
RFC4P35249 CHMP1AP1-201ENST00000445563 662 ntBASIC19.4■□□□□ 0.7
RFC4P35249 AC024681.1-201ENST00000521917 487 ntBASIC19.4■□□□□ 0.7
RFC4P35249 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.4■□□□□ 0.7
RFC4P35249 AP003171.2-201ENST00000528208 925 ntBASIC19.4■□□□□ 0.7
RFC4P35249 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RFC4P35249 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.4■□□□□ 0.7
RFC4P35249 RN7SL574P-201ENST00000581512 297 ntBASIC19.4■□□□□ 0.7
RFC4P35249 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.4■□□□□ 0.7
RFC4P35249 AL023803.2-201ENST00000620080 638 ntBASIC19.4■□□□□ 0.7
RFC4P35249 AC100757.4-201ENST00000626934 759 ntBASIC19.4■□□□□ 0.7
RFC4P35249 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.4■□□□□ 0.7
RFC4P35249 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RFC4P35249 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 KRT8P29-201ENST00000420409 1371 ntBASIC19.4■□□□□ 0.7
RFC4P35249 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
RFC4P35249 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC4P35249 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RFC4P35249 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RFC4P35249 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RFC4P35249 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
RFC4P35249 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RFC4P35249 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC4P35249 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC4P35249 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC4P35249 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC4P35249 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC4P35249 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC4P35249 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC4P35249 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.39■□□□□ 0.69
RFC4P35249 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.39■□□□□ 0.69
RFC4P35249 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.39■□□□□ 0.69
RFC4P35249 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.39■□□□□ 0.69
RFC4P35249 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC4P35249 NUP210P1-202ENST00000504322 710 ntBASIC19.39■□□□□ 0.69
RFC4P35249 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.39■□□□□ 0.69
RFC4P35249 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.39■□□□□ 0.69
RFC4P35249 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.39■□□□□ 0.69
RFC4P35249 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.39■□□□□ 0.69
RFC4P35249 AL133499.1-201ENST00000596207 608 ntBASIC19.39■□□□□ 0.69
RFC4P35249 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.39■□□□□ 0.69
RFC4P35249 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC4P35249 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC4P35249 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFC4P35249 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.39■□□□□ 0.69
RFC4P35249 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RFC4P35249 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC4P35249 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RFC4P35249 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC4P35249 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC4P35249 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RFC4P35249 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RFC4P35249 DPM3-202ENST00000368399 517 ntBASIC19.38■□□□□ 0.69
RFC4P35249 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RFC4P35249 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC4P35249 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC4P35249 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.38■□□□□ 0.69
RFC4P35249 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RFC4P35249 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC4P35249 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.38■□□□□ 0.69
RFC4P35249 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC4P35249 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC4P35249 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.38■□□□□ 0.69
RFC4P35249 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.38■□□□□ 0.69
RFC4P35249 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 AC022748.3-201ENST00000621828 275 ntBASIC19.38■□□□□ 0.69
RFC4P35249 AC092978.1-202ENST00000637590 1327 ntBASIC19.38■□□□□ 0.69
RFC4P35249 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC4P35249 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms