Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.93□□□□□ -0.18
HOXC12P31275 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.93□□□□□ -0.18
HOXC12P31275 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.93□□□□□ -0.18
HOXC12P31275 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXC12P31275 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXC12P31275 AC044860.1-202ENST00000559481 777 ntBASIC13.93□□□□□ -0.18
HOXC12P31275 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.93□□□□□ -0.18
HOXC12P31275 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HOXC12P31275 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.93□□□□□ -0.18
HOXC12P31275 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 AL109936.8-201ENST00000641772 604 ntBASIC13.93□□□□□ -0.18
HOXC12P31275 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXC12P31275 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HOXC12P31275 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.93□□□□□ -0.18
HOXC12P31275 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.93□□□□□ -0.18
HOXC12P31275 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HOXC12P31275 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.92□□□□□ -0.18
HOXC12P31275 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HOXC12P31275 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HOXC12P31275 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.92□□□□□ -0.18
HOXC12P31275 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.92□□□□□ -0.18
HOXC12P31275 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HOXC12P31275 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.92□□□□□ -0.18
HOXC12P31275 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.92□□□□□ -0.18
HOXC12P31275 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.92□□□□□ -0.18
HOXC12P31275 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 AC092658.1-201ENST00000505836 891 ntBASIC13.92□□□□□ -0.18
HOXC12P31275 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.92□□□□□ -0.18
HOXC12P31275 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HOXC12P31275 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
HOXC12P31275 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
HOXC12P31275 CHCHD2P3-201ENST00000603038 451 ntBASIC13.92□□□□□ -0.18
HOXC12P31275 AC084346.2-201ENST00000607097 949 ntBASIC13.92□□□□□ -0.18
HOXC12P31275 OR2I1P-210ENST00000642037 4691 ntBASIC13.92□□□□□ -0.18
HOXC12P31275 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.92□□□□□ -0.18
HOXC12P31275 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.92□□□□□ -0.18
HOXC12P31275 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
HOXC12P31275 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
HOXC12P31275 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HOXC12P31275 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HOXC12P31275 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.92□□□□□ -0.18
HOXC12P31275 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.92□□□□□ -0.18
HOXC12P31275 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.92□□□□□ -0.18
HOXC12P31275 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HOXC12P31275 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXC12P31275 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HOXC12P31275 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
HOXC12P31275 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.92□□□□□ -0.18
HOXC12P31275 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.92□□□□□ -0.18
HOXC12P31275 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HOXC12P31275 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HOXC12P31275 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXC12P31275 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HOXC12P31275 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HOXC12P31275 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HOXC12P31275 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.91□□□□□ -0.18
HOXC12P31275 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXC12P31275 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXC12P31275 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
HOXC12P31275 AZGP1P1-201ENST00000411909 902 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms