Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATF1P18846 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ATF1P18846 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.79□□□□□ -0.2
ATF1P18846 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.79□□□□□ -0.2
ATF1P18846 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.78□□□□□ -0.2
ATF1P18846 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 CICP14-201ENST00000629111 2732 ntBASIC13.78□□□□□ -0.2
ATF1P18846 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ATF1P18846 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.78□□□□□ -0.2
ATF1P18846 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
ATF1P18846 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
ATF1P18846 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
ATF1P18846 AL590627.1-203ENST00000421194 1026 ntBASIC13.78□□□□□ -0.2
ATF1P18846 AL671277.1-201ENST00000429656 993 ntBASIC13.78□□□□□ -0.2
ATF1P18846 AL591424.1-201ENST00000442569 1213 ntBASIC13.78□□□□□ -0.2
ATF1P18846 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.78□□□□□ -0.2
ATF1P18846 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.78□□□□□ -0.2
ATF1P18846 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.78□□□□□ -0.2
ATF1P18846 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.78□□□□□ -0.2
ATF1P18846 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.78□□□□□ -0.2
ATF1P18846 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.78□□□□□ -0.2
ATF1P18846 AC027307.2-201ENST00000591252 911 ntBASIC13.78□□□□□ -0.2
ATF1P18846 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.78□□□□□ -0.2
ATF1P18846 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.78□□□□□ -0.2
ATF1P18846 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.78□□□□□ -0.2
ATF1P18846 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.78□□□□□ -0.2
ATF1P18846 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.78□□□□□ -0.2
ATF1P18846 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.78□□□□□ -0.2
ATF1P18846 FOXO1B-201ENST00000504678 1527 ntBASIC13.78□□□□□ -0.2
ATF1P18846 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.78□□□□□ -0.2
ATF1P18846 MYO15B-237ENST00000642007 4893 ntBASIC13.78□□□□□ -0.2
ATF1P18846 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.78□□□□□ -0.2
ATF1P18846 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.78□□□□□ -0.2
ATF1P18846 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.78□□□□□ -0.2
ATF1P18846 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.78□□□□□ -0.2
ATF1P18846 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.78□□□□□ -0.2
ATF1P18846 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATF1P18846 MIR600HG-201ENST00000449175 5984 ntBASIC13.77□□□□□ -0.2
ATF1P18846 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATF1P18846 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
ATF1P18846 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATF1P18846 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATF1P18846 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATF1P18846 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATF1P18846 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATF1P18846 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.77□□□□□ -0.21
ATF1P18846 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
ATF1P18846 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.77□□□□□ -0.21
ATF1P18846 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ATF1P18846 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.77□□□□□ -0.21
ATF1P18846 TFAMP1-201ENST00000412727 736 ntBASIC13.77□□□□□ -0.21
ATF1P18846 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ATF1P18846 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
ATF1P18846 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.77□□□□□ -0.21
ATF1P18846 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.77□□□□□ -0.21
ATF1P18846 KRT18P3-201ENST00000451602 1288 ntBASIC13.77□□□□□ -0.21
ATF1P18846 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.77□□□□□ -0.21
ATF1P18846 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ATF1P18846 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 BNIP3P1-202ENST00000550043 1585 ntBASIC13.77□□□□□ -0.21
ATF1P18846 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.77□□□□□ -0.21
ATF1P18846 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATF1P18846 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms