Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DOBP13765 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DOBP13765 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DOBP13765 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DOBP13765 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DOBP13765 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DOBP13765 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DOBP13765 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DOBP13765 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DOBP13765 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DOBP13765 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.04□□□□□ -0.16
HLA-DOBP13765 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.04□□□□□ -0.16
HLA-DOBP13765 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 IGHV3-42-201ENST00000520410 361 ntBASIC14.04□□□□□ -0.16
HLA-DOBP13765 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 AC044860.1-202ENST00000559481 777 ntBASIC14.04□□□□□ -0.16
HLA-DOBP13765 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 AC087499.5-201ENST00000452760 1342 ntBASIC14.04□□□□□ -0.16
HLA-DOBP13765 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DOBP13765 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DOBP13765 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 AC023157.3-201ENST00000619086 2088 ntBASIC14.03□□□□□ -0.16
HLA-DOBP13765 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms