Protein–RNA interactions for Protein: P13646

KRT13, Keratin, type I cytoskeletal 13, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13P13646 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT13P13646 AC087499.5-201ENST00000452760 1342 ntBASIC17.15■□□□□ 0.34
KRT13P13646 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT13P13646 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT13P13646 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
KRT13P13646 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT13P13646 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
KRT13P13646 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.15■□□□□ 0.34
KRT13P13646 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.14■□□□□ 0.34
KRT13P13646 AC009090.5-201ENST00000624886 2285 ntBASIC17.14■□□□□ 0.33
KRT13P13646 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT13P13646 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT13P13646 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KRT13P13646 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT13P13646 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
KRT13P13646 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KRT13P13646 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
KRT13P13646 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
KRT13P13646 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.14■□□□□ 0.33
KRT13P13646 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT13P13646 SLED1-202ENST00000512051 380 ntBASIC17.14■□□□□ 0.33
KRT13P13646 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.14■□□□□ 0.33
KRT13P13646 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
KRT13P13646 DUX4L27-201ENST00000554796 1261 ntBASIC17.14■□□□□ 0.33
KRT13P13646 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT13P13646 AC010336.2-201ENST00000564226 506 ntBASIC17.14■□□□□ 0.33
KRT13P13646 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT13P13646 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
KRT13P13646 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT13P13646 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT13P13646 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
KRT13P13646 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT13P13646 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
KRT13P13646 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT13P13646 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
KRT13P13646 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KRT13P13646 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT13P13646 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 AC100757.3-201ENST00000622361 1406 ntBASIC17.13■□□□□ 0.33
KRT13P13646 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT13P13646 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT13P13646 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT13P13646 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT13P13646 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT13P13646 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT13P13646 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT13P13646 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT13P13646 SDHAP3-202ENST00000515467 728 ntBASIC17.13■□□□□ 0.33
KRT13P13646 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT13P13646 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT13P13646 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KRT13P13646 AC074044.1-201ENST00000609673 707 ntBASIC17.13■□□□□ 0.33
KRT13P13646 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KRT13P13646 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT13P13646 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
KRT13P13646 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KRT13P13646 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT13P13646 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms