Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
MS4A1P11836 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.11■□□□□ 0.81
MS4A1P11836 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 RPL5P21-201ENST00000404620 815 ntBASIC20.11■□□□□ 0.81
MS4A1P11836 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.11■□□□□ 0.81
MS4A1P11836 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
MS4A1P11836 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.11■□□□□ 0.81
MS4A1P11836 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.11■□□□□ 0.81
MS4A1P11836 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.11■□□□□ 0.81
MS4A1P11836 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.11■□□□□ 0.81
MS4A1P11836 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
MS4A1P11836 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
MS4A1P11836 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC20.11■□□□□ 0.81
MS4A1P11836 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC20.11■□□□□ 0.81
MS4A1P11836 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MS4A1P11836 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MS4A1P11836 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MS4A1P11836 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MS4A1P11836 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MS4A1P11836 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MS4A1P11836 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.1■□□□□ 0.81
MS4A1P11836 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.1■□□□□ 0.81
MS4A1P11836 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MS4A1P11836 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MS4A1P11836 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MS4A1P11836 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.1■□□□□ 0.81
MS4A1P11836 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC20.1■□□□□ 0.81
MS4A1P11836 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.1■□□□□ 0.81
MS4A1P11836 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.1■□□□□ 0.81
MS4A1P11836 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
MS4A1P11836 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
MS4A1P11836 AC027612.4-201ENST00000605371 583 ntBASIC20.1■□□□□ 0.81
MS4A1P11836 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.1■□□□□ 0.81
MS4A1P11836 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MS4A1P11836 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC20.1■□□□□ 0.81
MS4A1P11836 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MS4A1P11836 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MS4A1P11836 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.1■□□□□ 0.81
MS4A1P11836 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MS4A1P11836 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
MS4A1P11836 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MS4A1P11836 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 STK33-217ENST00000534493 1895 ntTSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.09■□□□□ 0.81
MS4A1P11836 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.09■□□□□ 0.81
MS4A1P11836 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
MS4A1P11836 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 DNAJB3-202ENST00000449667 1266 ntBASIC20.09■□□□□ 0.81
MS4A1P11836 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.09■□□□□ 0.81
MS4A1P11836 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.09■□□□□ 0.81
MS4A1P11836 AL596442.2-201ENST00000610240 980 ntBASIC20.09■□□□□ 0.81
MS4A1P11836 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.09■□□□□ 0.81
MS4A1P11836 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.09■□□□□ 0.81
MS4A1P11836 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.09■□□□□ 0.81
MS4A1P11836 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC20.09■□□□□ 0.81
MS4A1P11836 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MS4A1P11836 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
MS4A1P11836 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms