Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.62□□□□□ -0.23
CSF1P09603 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.62□□□□□ -0.23
CSF1P09603 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.62□□□□□ -0.23
CSF1P09603 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CSF1P09603 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CSF1P09603 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CSF1P09603 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CSF1P09603 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.62□□□□□ -0.23
CSF1P09603 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
CSF1P09603 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.62□□□□□ -0.23
CSF1P09603 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CSF1P09603 KRT18P27-201ENST00000427733 1299 ntBASIC13.62□□□□□ -0.23
CSF1P09603 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.62□□□□□ -0.23
CSF1P09603 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.62□□□□□ -0.23
CSF1P09603 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.62□□□□□ -0.23
CSF1P09603 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.62□□□□□ -0.23
CSF1P09603 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CSF1P09603 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.62□□□□□ -0.23
CSF1P09603 MIR4751-201ENST00000578027 74 ntBASIC13.62□□□□□ -0.23
CSF1P09603 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.62□□□□□ -0.23
CSF1P09603 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
CSF1P09603 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.62□□□□□ -0.23
CSF1P09603 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.62□□□□□ -0.23
CSF1P09603 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.62□□□□□ -0.23
CSF1P09603 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
CSF1P09603 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CSF1P09603 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CSF1P09603 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSF1P09603 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.61□□□□□ -0.23
CSF1P09603 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CSF1P09603 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.61□□□□□ -0.23
CSF1P09603 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
CSF1P09603 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CSF1P09603 AC012569.1-201ENST00000591191 1524 ntBASIC13.61□□□□□ -0.23
CSF1P09603 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.61□□□□□ -0.23
CSF1P09603 MCCD1P2-201ENST00000423228 335 ntBASIC13.61□□□□□ -0.23
CSF1P09603 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.61□□□□□ -0.23
CSF1P09603 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.61□□□□□ -0.23
CSF1P09603 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.61□□□□□ -0.23
CSF1P09603 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
CSF1P09603 AC004706.3-202ENST00000621574 984 ntBASIC13.61□□□□□ -0.23
CSF1P09603 AL805961.1-202ENST00000641562 540 ntBASIC13.61□□□□□ -0.23
CSF1P09603 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CSF1P09603 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.61□□□□□ -0.23
CSF1P09603 ST20-AS1-201ENST00000560255 4223 ntBASIC13.61□□□□□ -0.23
CSF1P09603 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSF1P09603 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CSF1P09603 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSF1P09603 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.6□□□□□ -0.23
CSF1P09603 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSF1P09603 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSF1P09603 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CSF1P09603 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSF1P09603 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CSF1P09603 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.6□□□□□ -0.23
CSF1P09603 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.6□□□□□ -0.23
CSF1P09603 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms