Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.42□□□□□ -0.42
CSN3P07498 RNA5SP410-201ENST00000516285 106 ntBASIC12.42□□□□□ -0.42
CSN3P07498 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.42□□□□□ -0.42
CSN3P07498 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 AC018529.1-201ENST00000613063 361 ntBASIC12.42□□□□□ -0.42
CSN3P07498 MIR6080-201ENST00000617359 66 ntBASIC12.42□□□□□ -0.42
CSN3P07498 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.42□□□□□ -0.42
CSN3P07498 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 SNX18-202ENST00000343017 3140 ntBASIC12.42□□□□□ -0.42
CSN3P07498 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.42□□□□□ -0.42
CSN3P07498 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CSN3P07498 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.42□□□□□ -0.42
CSN3P07498 AC008677.1-201ENST00000519230 1561 ntBASIC12.42□□□□□ -0.42
CSN3P07498 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.42□□□□□ -0.42
CSN3P07498 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
CSN3P07498 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.42□□□□□ -0.42
CSN3P07498 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
CSN3P07498 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CSN3P07498 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CSN3P07498 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSN3P07498 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.42□□□□□ -0.42
CSN3P07498 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.41□□□□□ -0.42
CSN3P07498 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.41□□□□□ -0.42
CSN3P07498 AL596087.1-201ENST00000400979 1969 ntBASIC12.41□□□□□ -0.42
CSN3P07498 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.41□□□□□ -0.42
CSN3P07498 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.41□□□□□ -0.42
CSN3P07498 TUBB3P1-201ENST00000405796 1332 ntBASIC12.41□□□□□ -0.42
CSN3P07498 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.41□□□□□ -0.42
CSN3P07498 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CSN3P07498 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.41□□□□□ -0.42
CSN3P07498 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.41□□□□□ -0.42
CSN3P07498 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.41□□□□□ -0.42
CSN3P07498 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.41□□□□□ -0.42
CSN3P07498 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CSN3P07498 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
CSN3P07498 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CSN3P07498 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.41□□□□□ -0.42
CSN3P07498 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.41□□□□□ -0.42
CSN3P07498 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.41□□□□□ -0.42
CSN3P07498 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.41□□□□□ -0.42
CSN3P07498 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.41□□□□□ -0.42
CSN3P07498 CYMP-203ENST00000474680 1263 ntBASIC12.41□□□□□ -0.42
CSN3P07498 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 AC067863.1-201ENST00000494933 530 ntBASIC12.41□□□□□ -0.42
CSN3P07498 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
CSN3P07498 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.41□□□□□ -0.42
CSN3P07498 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.41□□□□□ -0.42
CSN3P07498 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.41□□□□□ -0.42
CSN3P07498 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CSN3P07498 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
CSN3P07498 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.41□□□□□ -0.42
CSN3P07498 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CSN3P07498 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.41□□□□□ -0.42
CSN3P07498 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CSN3P07498 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.41□□□□□ -0.42
CSN3P07498 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSN3P07498 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CSN3P07498 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.4□□□□□ -0.42
CSN3P07498 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CSN3P07498 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSN3P07498 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.4□□□□□ -0.42
CSN3P07498 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSN3P07498 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.4□□□□□ -0.42
CSN3P07498 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CSN3P07498 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CSN3P07498 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms