Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.14□□□□□ -0.15
HLA-DPB1P04440 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 AC134407.2-201ENST00000625089 1978 ntBASIC14.13□□□□□ -0.15
HLA-DPB1P04440 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 AC092474.2-201ENST00000424288 719 ntBASIC14.13□□□□□ -0.15
HLA-DPB1P04440 FAM58CP-201ENST00000435741 640 ntBASIC14.13□□□□□ -0.15
HLA-DPB1P04440 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 AC112191.1-201ENST00000523689 701 ntBASIC14.13□□□□□ -0.15
HLA-DPB1P04440 AC109635.5-201ENST00000533593 962 ntBASIC14.13□□□□□ -0.15
HLA-DPB1P04440 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 AL078644.1-201ENST00000609881 752 ntBASIC14.13□□□□□ -0.15
HLA-DPB1P04440 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 ST20-AS1-201ENST00000560255 4223 ntBASIC14.13□□□□□ -0.15
HLA-DPB1P04440 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 AC009090.5-201ENST00000624886 2285 ntBASIC14.13□□□□□ -0.15
HLA-DPB1P04440 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 AJ011931.1-201ENST00000618749 2492 ntBASIC14.13□□□□□ -0.15
HLA-DPB1P04440 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DPB1P04440 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 CICP4-201ENST00000447359 2812 ntBASIC14.12□□□□□ -0.15
HLA-DPB1P04440 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 AC148477.4-201ENST00000613430 1793 ntBASIC14.12□□□□□ -0.15
HLA-DPB1P04440 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 AC002056.1-201ENST00000395613 760 ntBASIC14.12□□□□□ -0.15
HLA-DPB1P04440 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DPB1P04440 MCCD1P2-201ENST00000423228 335 ntBASIC14.12□□□□□ -0.15
HLA-DPB1P04440 AC004832.2-201ENST00000426397 482 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms