Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PDGFAP04085 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PDGFAP04085 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.7□□□□□ -0.06
PDGFAP04085 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PDGFAP04085 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
PDGFAP04085 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PDGFAP04085 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PDGFAP04085 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.7□□□□□ -0.06
PDGFAP04085 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.7□□□□□ -0.06
PDGFAP04085 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 AC060834.1-201ENST00000443027 2032 ntBASIC14.7□□□□□ -0.06
PDGFAP04085 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PDGFAP04085 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.7□□□□□ -0.06
PDGFAP04085 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.7□□□□□ -0.06
PDGFAP04085 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.7□□□□□ -0.06
PDGFAP04085 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
PDGFAP04085 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PDGFAP04085 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PDGFAP04085 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.7□□□□□ -0.06
PDGFAP04085 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 KRT43P-201ENST00000434019 910 ntBASIC14.7□□□□□ -0.06
PDGFAP04085 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.7□□□□□ -0.06
PDGFAP04085 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.7□□□□□ -0.06
PDGFAP04085 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.7□□□□□ -0.06
PDGFAP04085 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PDGFAP04085 AP002490.2-201ENST00000524791 560 ntBASIC14.7□□□□□ -0.06
PDGFAP04085 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.7□□□□□ -0.06
PDGFAP04085 SLC25A47P1-201ENST00000531577 414 ntBASIC14.7□□□□□ -0.06
PDGFAP04085 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.7□□□□□ -0.06
PDGFAP04085 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.7□□□□□ -0.06
PDGFAP04085 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PDGFAP04085 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.7□□□□□ -0.06
PDGFAP04085 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.7□□□□□ -0.06
PDGFAP04085 AL158212.4-201ENST00000624062 1286 ntBASIC14.7□□□□□ -0.06
PDGFAP04085 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.7□□□□□ -0.06
PDGFAP04085 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PDGFAP04085 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PDGFAP04085 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.7□□□□□ -0.06
PDGFAP04085 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDGFAP04085 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.7□□□□□ -0.06
PDGFAP04085 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.7□□□□□ -0.06
PDGFAP04085 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.7□□□□□ -0.06
PDGFAP04085 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.7□□□□□ -0.06
PDGFAP04085 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
PDGFAP04085 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.7□□□□□ -0.06
PDGFAP04085 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.69□□□□□ -0.06
PDGFAP04085 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PDGFAP04085 AC005622.1-201ENST00000636801 1703 ntBASIC14.69□□□□□ -0.06
PDGFAP04085 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.69□□□□□ -0.06
PDGFAP04085 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
PDGFAP04085 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.69□□□□□ -0.06
PDGFAP04085 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.69□□□□□ -0.06
PDGFAP04085 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.69□□□□□ -0.06
PDGFAP04085 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.69□□□□□ -0.06
PDGFAP04085 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PDGFAP04085 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 AC099336.1-201ENST00000417053 1171 ntBASIC14.69□□□□□ -0.06
PDGFAP04085 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.69□□□□□ -0.06
PDGFAP04085 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.69□□□□□ -0.06
PDGFAP04085 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PDGFAP04085 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PDGFAP04085 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PDGFAP04085 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.69□□□□□ -0.06
PDGFAP04085 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.69□□□□□ -0.06
PDGFAP04085 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.69□□□□□ -0.06
PDGFAP04085 RN7SL219P-201ENST00000582872 296 ntBASIC14.69□□□□□ -0.06
PDGFAP04085 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.69□□□□□ -0.06
PDGFAP04085 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PDGFAP04085 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PDGFAP04085 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDGFAP04085 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms