Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.84□□□□□ -0.03
MT-ND1P03886 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
MT-ND1P03886 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
MT-ND1P03886 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-ND1P03886 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
MT-ND1P03886 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MT-ND1P03886 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MT-ND1P03886 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MT-ND1P03886 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.83□□□□□ -0.03
MT-ND1P03886 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.83□□□□□ -0.03
MT-ND1P03886 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MT-ND1P03886 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 BNIP3P1-202ENST00000550043 1585 ntBASIC14.83□□□□□ -0.04
MT-ND1P03886 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.83□□□□□ -0.04
MT-ND1P03886 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.83□□□□□ -0.04
MT-ND1P03886 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
MT-ND1P03886 AC026396.1-201ENST00000419388 421 ntBASIC14.83□□□□□ -0.04
MT-ND1P03886 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 AC140658.5-201ENST00000438532 169 ntBASIC14.83□□□□□ -0.04
MT-ND1P03886 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.83□□□□□ -0.04
MT-ND1P03886 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
MT-ND1P03886 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.83□□□□□ -0.04
MT-ND1P03886 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.83□□□□□ -0.04
MT-ND1P03886 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
MT-ND1P03886 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 CICP14-201ENST00000629111 2732 ntBASIC14.83□□□□□ -0.04
MT-ND1P03886 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
MT-ND1P03886 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
MT-ND1P03886 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
MT-ND1P03886 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MT-ND1P03886 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
MT-ND1P03886 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
MT-ND1P03886 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
MT-ND1P03886 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 REXO1L1P-202ENST00000608646 1974 ntBASIC14.82□□□□□ -0.04
MT-ND1P03886 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
MT-ND1P03886 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MT-ND1P03886 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
MT-ND1P03886 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
MT-ND1P03886 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
MT-ND1P03886 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
MT-ND1P03886 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.82□□□□□ -0.04
MT-ND1P03886 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MT-ND1P03886 AC009078.2-202ENST00000463353 338 ntBASIC14.82□□□□□ -0.04
MT-ND1P03886 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.82□□□□□ -0.04
MT-ND1P03886 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms