Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.15□□□□□ -0.3
SIX6O95475 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SIX6O95475 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.15□□□□□ -0.3
SIX6O95475 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.15□□□□□ -0.3
SIX6O95475 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.15□□□□□ -0.3
SIX6O95475 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SIX6O95475 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
SIX6O95475 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.15□□□□□ -0.3
SIX6O95475 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SIX6O95475 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SIX6O95475 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.15□□□□□ -0.3
SIX6O95475 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SIX6O95475 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SIX6O95475 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.15□□□□□ -0.3
SIX6O95475 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SIX6O95475 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SIX6O95475 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.15□□□□□ -0.3
SIX6O95475 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.15□□□□□ -0.3
SIX6O95475 AC245100.5-201ENST00000452108 331 ntBASIC13.15□□□□□ -0.3
SIX6O95475 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.15□□□□□ -0.3
SIX6O95475 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 AC005412.3-201ENST00000580309 715 ntBASIC13.15□□□□□ -0.3
SIX6O95475 MIR4313-201ENST00000580760 101 ntBASIC13.15□□□□□ -0.3
SIX6O95475 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.15□□□□□ -0.3
SIX6O95475 AF228730.7-201ENST00000641842 219 ntBASIC13.15□□□□□ -0.3
SIX6O95475 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.15□□□□□ -0.3
SIX6O95475 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SIX6O95475 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.15□□□□□ -0.3
SIX6O95475 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 AC138969.2-201ENST00000532739 9932 ntBASIC13.15□□□□□ -0.3
SIX6O95475 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.15□□□□□ -0.3
SIX6O95475 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SIX6O95475 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
SIX6O95475 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.14□□□□□ -0.31
SIX6O95475 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.14□□□□□ -0.31
SIX6O95475 ACE3P-201ENST00000423435 1973 ntBASIC13.14□□□□□ -0.31
SIX6O95475 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SIX6O95475 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SIX6O95475 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SIX6O95475 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.14□□□□□ -0.31
SIX6O95475 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SIX6O95475 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SIX6O95475 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.14□□□□□ -0.31
SIX6O95475 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SIX6O95475 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 RNF152P1-201ENST00000397754 604 ntBASIC13.14□□□□□ -0.31
SIX6O95475 PTCHD3P3-201ENST00000403073 906 ntBASIC13.14□□□□□ -0.31
SIX6O95475 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 PRYP5-201ENST00000451909 266 ntBASIC13.14□□□□□ -0.31
SIX6O95475 KRT8P26-201ENST00000534154 1276 ntBASIC13.14□□□□□ -0.31
SIX6O95475 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SIX6O95475 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.14□□□□□ -0.31
SIX6O95475 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.14□□□□□ -0.31
SIX6O95475 AC145285.6-201ENST00000604632 637 ntBASIC13.14□□□□□ -0.31
SIX6O95475 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms