Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.24□□□□□ -0.29
PDCD6O75340 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.24□□□□□ -0.29
PDCD6O75340 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
PDCD6O75340 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
PDCD6O75340 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.24□□□□□ -0.29
PDCD6O75340 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
PDCD6O75340 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
PDCD6O75340 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.24□□□□□ -0.29
PDCD6O75340 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.24□□□□□ -0.29
PDCD6O75340 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.24□□□□□ -0.29
PDCD6O75340 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.24□□□□□ -0.29
PDCD6O75340 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.24□□□□□ -0.29
PDCD6O75340 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.24□□□□□ -0.29
PDCD6O75340 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
PDCD6O75340 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
PDCD6O75340 LINC00528-201ENST00000600723 2160 ntBASIC13.24□□□□□ -0.29
PDCD6O75340 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PDCD6O75340 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.24□□□□□ -0.29
PDCD6O75340 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
PDCD6O75340 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.23□□□□□ -0.29
PDCD6O75340 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.23□□□□□ -0.29
PDCD6O75340 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
PDCD6O75340 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 WASH3P-207ENST00000560956 1394 ntBASIC13.23□□□□□ -0.29
PDCD6O75340 FO538757.1-201ENST00000623083 1397 ntBASIC13.23□□□□□ -0.29
PDCD6O75340 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
PDCD6O75340 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PDCD6O75340 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
PDCD6O75340 MIR940-201ENST00000401276 94 ntBASIC13.23□□□□□ -0.29
PDCD6O75340 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 AC004832.2-201ENST00000426397 482 ntBASIC13.23□□□□□ -0.29
PDCD6O75340 HTR5BP-201ENST00000430851 1154 ntBASIC13.23□□□□□ -0.29
PDCD6O75340 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.23□□□□□ -0.29
PDCD6O75340 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.23□□□□□ -0.29
PDCD6O75340 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.23□□□□□ -0.29
PDCD6O75340 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.23□□□□□ -0.29
PDCD6O75340 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
PDCD6O75340 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.23□□□□□ -0.29
PDCD6O75340 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PDCD6O75340 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms