Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
DLX3O60479 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
DLX3O60479 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.35■□□□□ 0.05
DLX3O60479 MIR574-201ENST00000385209 96 ntBASIC15.35■□□□□ 0.05
DLX3O60479 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 AC005237.2-201ENST00000434368 219 ntBASIC15.35■□□□□ 0.05
DLX3O60479 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.35■□□□□ 0.05
DLX3O60479 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.35■□□□□ 0.05
DLX3O60479 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.35■□□□□ 0.05
DLX3O60479 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.35■□□□□ 0.05
DLX3O60479 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 KRT18P58-201ENST00000527480 1120 ntBASIC15.35■□□□□ 0.05
DLX3O60479 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.35■□□□□ 0.05
DLX3O60479 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.35■□□□□ 0.05
DLX3O60479 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
DLX3O60479 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.35■□□□□ 0.05
DLX3O60479 AL133215.2-201ENST00000609242 977 ntBASIC15.35■□□□□ 0.05
DLX3O60479 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DLX3O60479 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.35■□□□□ 0.05
DLX3O60479 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
DLX3O60479 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.35■□□□□ 0.05
DLX3O60479 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 ELL2P1-201ENST00000413990 1906 ntBASIC15.35■□□□□ 0.05
DLX3O60479 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.35■□□□□ 0.05
DLX3O60479 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
DLX3O60479 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.34■□□□□ 0.05
DLX3O60479 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.34■□□□□ 0.05
DLX3O60479 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.34■□□□□ 0.05
DLX3O60479 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.34■□□□□ 0.05
DLX3O60479 TARDBPP1-201ENST00000442013 1203 ntBASIC15.34■□□□□ 0.05
DLX3O60479 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.34■□□□□ 0.05
DLX3O60479 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.34■□□□□ 0.05
DLX3O60479 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.34■□□□□ 0.05
DLX3O60479 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.34■□□□□ 0.05
DLX3O60479 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 ACE3P-201ENST00000423435 1973 ntBASIC15.34■□□□□ 0.05
DLX3O60479 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.34■□□□□ 0.05
DLX3O60479 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
DLX3O60479 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DLX3O60479 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms