Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.95□□□□□ -0.18
TRAF3IP2O43734 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 BASP1P1-201ENST00000430708 665 ntBASIC13.95□□□□□ -0.18
TRAF3IP2O43734 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 AC092337.1-201ENST00000568699 1129 ntBASIC13.95□□□□□ -0.18
TRAF3IP2O43734 AC015910.1-201ENST00000579400 975 ntBASIC13.95□□□□□ -0.18
TRAF3IP2O43734 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 AC084364.1-201ENST00000551967 1556 ntBASIC13.95□□□□□ -0.18
TRAF3IP2O43734 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 AL109954.1-202ENST00000564051 2148 ntBASIC13.94□□□□□ -0.18
TRAF3IP2O43734 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 AC027796.2-201ENST00000575326 344 ntBASIC13.94□□□□□ -0.18
TRAF3IP2O43734 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 AC138035.3-201ENST00000622706 2791 ntBASIC13.94□□□□□ -0.18
TRAF3IP2O43734 AC004840.1-201ENST00000636359 365 ntBASIC13.94□□□□□ -0.18
TRAF3IP2O43734 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAF3IP2O43734 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms