Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
O00370 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
O00370 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.69■□□□□ 0.26
O00370 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.69■□□□□ 0.26
O00370 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
O00370 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.69■□□□□ 0.26
O00370 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.69■□□□□ 0.26
O00370 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.69■□□□□ 0.26
O00370 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
O00370 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.68■□□□□ 0.26
O00370 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
O00370 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.68■□□□□ 0.26
O00370 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.68■□□□□ 0.26
O00370 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
O00370 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
O00370 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.68■□□□□ 0.26
O00370 TOMM22P5-201ENST00000416399 439 ntBASIC16.68■□□□□ 0.26
O00370 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.68■□□□□ 0.26
O00370 HMGN1P19-201ENST00000436976 333 ntBASIC16.68■□□□□ 0.26
O00370 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.68■□□□□ 0.26
O00370 AL589987.1-201ENST00000453380 819 ntBASIC16.68■□□□□ 0.26
O00370 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.68■□□□□ 0.26
O00370 AC104794.3-201ENST00000566840 1248 ntBASIC16.68■□□□□ 0.26
O00370 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.68■□□□□ 0.26
O00370 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.68■□□□□ 0.26
O00370 AC011467.4-201ENST00000594891 528 ntBASIC16.68■□□□□ 0.26
O00370 SRD5A3P1-201ENST00000603021 949 ntBASIC16.68■□□□□ 0.26
O00370 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.68■□□□□ 0.26
O00370 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
O00370 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
O00370 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
O00370 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.68■□□□□ 0.26
O00370 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.68■□□□□ 0.26
O00370 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.68■□□□□ 0.26
O00370 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
O00370 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
O00370 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
O00370 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
O00370 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.67■□□□□ 0.26
O00370 AC138035.3-201ENST00000622706 2791 ntBASIC16.67■□□□□ 0.26
O00370 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
O00370 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
O00370 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
O00370 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.67■□□□□ 0.26
O00370 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
O00370 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.67■□□□□ 0.26
O00370 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 AC023157.3-201ENST00000619086 2088 ntBASIC16.67■□□□□ 0.26
O00370 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
O00370 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.67■□□□□ 0.26
O00370 MIR661-201ENST00000384842 89 ntBASIC16.67■□□□□ 0.26
O00370 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
O00370 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.67■□□□□ 0.26
O00370 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.67■□□□□ 0.26
O00370 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.67■□□□□ 0.26
O00370 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.67■□□□□ 0.26
O00370 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.67■□□□□ 0.26
O00370 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.67■□□□□ 0.26
O00370 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.67■□□□□ 0.26
O00370 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
O00370 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
O00370 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
O00370 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
O00370 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms