Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AL080243.2-201ENST00000418783 582 ntBASIC15.83■□□□□ 0.12
AP3B1O00203 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.83■□□□□ 0.12
AP3B1O00203 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.83■□□□□ 0.12
AP3B1O00203 CNN2P2-201ENST00000443536 909 ntBASIC15.83■□□□□ 0.12
AP3B1O00203 CNN2P3-201ENST00000450201 906 ntBASIC15.83■□□□□ 0.12
AP3B1O00203 AC004967.1-201ENST00000453589 447 ntBASIC15.83■□□□□ 0.12
AP3B1O00203 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP3B1O00203 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.83■□□□□ 0.12
AP3B1O00203 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.83■□□□□ 0.12
AP3B1O00203 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.83■□□□□ 0.12
AP3B1O00203 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.83■□□□□ 0.12
AP3B1O00203 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.83■□□□□ 0.12
AP3B1O00203 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.83■□□□□ 0.12
AP3B1O00203 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
AP3B1O00203 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.83■□□□□ 0.12
AP3B1O00203 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
AP3B1O00203 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3B1O00203 AL136317.3-201ENST00000618497 906 ntBASIC15.83■□□□□ 0.12
AP3B1O00203 LINC00628-201ENST00000628516 1289 ntBASIC15.83■□□□□ 0.12
AP3B1O00203 AL645728.2-202ENST00000641679 227 ntBASIC15.83■□□□□ 0.12
AP3B1O00203 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3B1O00203 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3B1O00203 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
AP3B1O00203 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3B1O00203 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
AP3B1O00203 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.83■□□□□ 0.12
AP3B1O00203 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3B1O00203 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.83■□□□□ 0.12
AP3B1O00203 TCAF2P1-201ENST00000291129 2421 ntBASIC15.83■□□□□ 0.12
AP3B1O00203 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3B1O00203 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3B1O00203 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.83■□□□□ 0.12
AP3B1O00203 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
AP3B1O00203 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP3B1O00203 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3B1O00203 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.82■□□□□ 0.12
AP3B1O00203 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.82■□□□□ 0.12
AP3B1O00203 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
AP3B1O00203 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
AP3B1O00203 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.82■□□□□ 0.12
AP3B1O00203 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
AP3B1O00203 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3B1O00203 AC015910.1-201ENST00000579400 975 ntBASIC15.82■□□□□ 0.12
AP3B1O00203 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.82■□□□□ 0.12
AP3B1O00203 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.82■□□□□ 0.12
AP3B1O00203 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
AP3B1O00203 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3B1O00203 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 MROH4P-201ENST00000431302 1578 ntBASIC15.82■□□□□ 0.12
AP3B1O00203 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3B1O00203 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP3B1O00203 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.82■□□□□ 0.12
AP3B1O00203 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP3B1O00203 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3B1O00203 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.82■□□□□ 0.12
AP3B1O00203 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
AP3B1O00203 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
AP3B1O00203 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AP3B1O00203 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.81■□□□□ 0.12
AP3B1O00203 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
AP3B1O00203 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3B1O00203 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.81■□□□□ 0.12
AP3B1O00203 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
AP3B1O00203 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms