Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TTTY23B-201ENST00000442790 549 ntBASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 MIR8072-201ENST00000614241 80 ntBASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 AC022188.1-201ENST00000620960 1664 ntBASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA2E9PIF3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 EEF1DP4-201ENST00000446006 880 ntBASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 TMEM261P1-201ENST00000604899 340 ntBASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 WFDC1-204ENST00000613603 549 ntBASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA2E9PIF3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPA2E9PIF3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA2E9PIF3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
NPIPA2E9PIF3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA2E9PIF3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPA2E9PIF3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPA2E9PIF3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPA2E9PIF3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.27□□□□□ -0.12
NPIPA2E9PIF3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.27□□□□□ -0.12
NPIPA2E9PIF3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
NPIPA2E9PIF3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA2E9PIF3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 AC007274.1-201ENST00000439805 662 ntBASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 TARDBPP1-201ENST00000442013 1203 ntBASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 RN7SL399P-201ENST00000471648 279 ntBASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 AC036164.1-201ENST00000570544 333 ntBASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA2E9PIF3 AL033527.5-201ENST00000641382 801 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 346.3 ms