Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 DNAJB3-202ENST00000449667 1266 ntBASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 HLA-J-203ENST00000494367 1087 ntBASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 AC069262.1-201ENST00000539058 672 ntBASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 AC027612.4-201ENST00000605371 583 ntBASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 AL596442.2-201ENST00000610240 980 ntBASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 LINC00628-201ENST00000628516 1289 ntBASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 AC127383.1-201ENST00000444697 1800 ntBASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 SNX18-202ENST00000343017 3140 ntBASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 AC023908.3-201ENST00000564211 3047 ntBASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 MIR1233-2-201ENST00000408138 82 ntBASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 MIR1233-1-201ENST00000408722 82 ntBASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 AL645939.2-201ENST00000427340 991 ntBASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 AL079307.3-201ENST00000556114 283 ntBASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 RN7SL602P-201ENST00000578326 324 ntBASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA11Q9Y5H2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 CETN4P-206ENST00000642099 2168 ntBASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA11Q9Y5H2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms