Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 KRT8P37-201ENST00000451609 1420 ntBASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 AL049840.3-201ENST00000602669 611 ntBASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 AL773604.1-201ENST00000617417 272 ntBASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 AC004877.2-201ENST00000623941 599 ntBASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D4Q9Y2X8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 AC104581.4-201ENST00000623126 3052 ntBASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 AC139749.1-202ENST00000617529 3139 ntBASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 RPL5P21-201ENST00000404620 815 ntBASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 AL138918.1-201ENST00000568306 659 ntBASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
UBE2D4Q9Y2X8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms