Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 AC073621.1-201ENST00000392730 636 ntBASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 KRT18P34-201ENST00000488218 1270 ntBASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 AC107918.4-202ENST00000641623 219 ntBASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RCL1Q9Y2P8 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 AC138969.2-201ENST00000532739 9932 ntBASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 FAM8A3P-201ENST00000427218 844 ntBASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 AC136632.2-201ENST00000512891 861 ntBASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 IGHV3-65-201ENST00000523210 341 ntBASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 AC002347.1-201ENST00000569543 541 ntBASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 OR7E47P-204ENST00000575924 449 ntBASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 AC008608.2-201ENST00000606089 416 ntBASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 AC092119.3-201ENST00000612618 583 ntBASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
RCL1Q9Y2P8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.85□□□□□ -0.35
RCL1Q9Y2P8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RCL1Q9Y2P8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
RCL1Q9Y2P8 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms