Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 MIR4515-201ENST00000584082 81 ntBASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 AC026396.1-201ENST00000419388 421 ntBASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 AC105339.3-201ENST00000560043 636 ntBASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 AL031055.1-201ENST00000606362 631 ntBASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 ACTL9-202ENST00000612068 1252 ntBASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 AC092919.2-201ENST00000623631 1645 ntBASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C12orf4Q9NQ89 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.73□□□□□ -0.21
C12orf4Q9NQ89 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C12orf4Q9NQ89 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
C12orf4Q9NQ89 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.73□□□□□ -0.21
C12orf4Q9NQ89 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
C12orf4Q9NQ89 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
C12orf4Q9NQ89 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
C12orf4Q9NQ89 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms