Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 AC142381.1-201ENST00000426099 345 ntBASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 GPX1P2-201ENST00000429271 606 ntBASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 MKNK2P1-201ENST00000437526 628 ntBASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 ACTG1P14-201ENST00000446382 1122 ntBASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 GRK6P1-201ENST00000400595 1711 ntBASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHRDL1Q9BU40 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 CICP14-201ENST00000629111 2732 ntBASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 IGHV3-62-201ENST00000520057 340 ntBASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 LINC01225-203ENST00000563550 1244 ntBASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 AP000842.3-202ENST00000569238 1080 ntBASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms