Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 AL365203.3-201ENST00000609742 2057 ntBASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 AP005117.1-202ENST00000581724 1908 ntBASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP6V0A1Q93050 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 C1QBPP1-201ENST00000400117 770 ntBASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 BCRP2-202ENST00000447763 634 ntBASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 KLF2P4-201ENST00000451959 1225 ntBASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 BCRP6-201ENST00000510112 632 ntBASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 BCRP7-201ENST00000511549 544 ntBASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 REXO1L6P-201ENST00000603433 1515 ntBASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A1Q93050 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATP6V0A1Q93050 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 VDAC1P7-201ENST00000462417 847 ntBASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 AC120045.2-201ENST00000567334 178 ntBASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ATP6V0A1Q93050 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms