Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 CICP8-201ENST00000455800 2813 ntBASIC11.75□□□□□ -0.53
NUP35Q8NFH5 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 RNU1-129P-201ENST00000384064 167 ntBASIC11.75□□□□□ -0.53
NUP35Q8NFH5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 AL136038.3-201ENST00000561909 1096 ntBASIC11.75□□□□□ -0.53
NUP35Q8NFH5 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 U1.21-201ENST00000580816 167 ntBASIC11.75□□□□□ -0.53
NUP35Q8NFH5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 AP001269.4-201ENST00000609611 512 ntBASIC11.75□□□□□ -0.53
NUP35Q8NFH5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 AL139288.1-201ENST00000623748 933 ntBASIC11.75□□□□□ -0.53
NUP35Q8NFH5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NUP35Q8NFH5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.74□□□□□ -0.53
NUP35Q8NFH5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NUP35Q8NFH5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms