Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 AC092384.3-202ENST00000564646 2873 ntBASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 RNA5SP421-201ENST00000516864 134 ntBASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF2Q8N5M1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 AC022532.1-201ENST00000624563 1728 ntBASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 MIR770-201ENST00000390219 98 ntBASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 INGX-202ENST00000489074 768 ntBASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATPAF2Q8N5M1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms