Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 AC004233.3-201ENST00000607794 1269 ntBASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 AC007541.1-201ENST00000570282 1469 ntBASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCUBE3Q8IX30 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
SCUBE3Q8IX30 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
SCUBE3Q8IX30 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 AL121723.1-201ENST00000445194 1519 ntBASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 AL391069.4-201ENST00000609583 481 ntBASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 AL158212.4-201ENST00000624062 1286 ntBASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 AL358472.5-202ENST00000641448 1267 ntBASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 CLK3P2-201ENST00000427566 1453 ntBASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 PPT1-215ENST00000641471 2368 ntBASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCUBE3Q8IX30 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCUBE3Q8IX30 OR8S1-201ENST00000310194 1080 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms