Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 PAWRP1-201ENST00000451083 565 ntBASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 AC015818.8-201ENST00000587907 1519 ntBASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 AL353732.1-201ENST00000569618 1459 ntBASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 NCF1C-201ENST00000438382 1427 ntBASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 CICP11-201ENST00000434745 2827 ntBASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 KRT8P26-201ENST00000534154 1276 ntBASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 REXO1L3P-201ENST00000622202 1288 ntBASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 TMEM191A-211ENST00000637163 1067 ntBASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CROCCP3Q8IVE0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CROCCP3Q8IVE0 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms