Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1AQ71U36 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 ELL2P1-201ENST00000413990 1906 ntBASIC14.55□□□□□ -0.08
TUBA1AQ71U36 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 AP003680.1-201ENST00000598970 3660 ntBASIC14.55□□□□□ -0.08
TUBA1AQ71U36 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 AC211486.1-202ENST00000416371 468 ntBASIC14.55□□□□□ -0.08
TUBA1AQ71U36 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 AC211476.1-201ENST00000503899 468 ntBASIC14.55□□□□□ -0.08
TUBA1AQ71U36 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.55□□□□□ -0.08
TUBA1AQ71U36 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 AL596442.2-201ENST00000610240 980 ntBASIC14.55□□□□□ -0.08
TUBA1AQ71U36 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 AC134684.3-201ENST00000641758 218 ntBASIC14.55□□□□□ -0.08
TUBA1AQ71U36 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TUBA1AQ71U36 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 AL671277.1-201ENST00000429656 993 ntBASIC14.54□□□□□ -0.08
TUBA1AQ71U36 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 MKNK2P1-201ENST00000437526 628 ntBASIC14.54□□□□□ -0.08
TUBA1AQ71U36 TIMM8BP1-201ENST00000452384 211 ntBASIC14.54□□□□□ -0.08
TUBA1AQ71U36 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms