Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 AC005829.1-201ENST00000570002 483 ntBASIC16.04■□□□□ 0.16
CASC4Q6P4E1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 AC091951.1-201ENST00000512854 2465 ntBASIC16.04■□□□□ 0.16
CASC4Q6P4E1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 KRT18P32-201ENST00000424695 1287 ntBASIC16.03■□□□□ 0.16
CASC4Q6P4E1 AL353705.2-201ENST00000428243 662 ntBASIC16.03■□□□□ 0.16
CASC4Q6P4E1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CASC4Q6P4E1 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms