Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRRC38Q5VT99 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC38Q5VT99 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC38Q5VT99 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC38Q5VT99 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC38Q5VT99 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC38Q5VT99 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 LINC00528-201ENST00000600723 2160 ntBASIC16.23■□□□□ 0.19
LRRC38Q5VT99 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.23■□□□□ 0.19
LRRC38Q5VT99 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 AC104457.1-201ENST00000401024 814 ntBASIC16.23■□□□□ 0.19
LRRC38Q5VT99 TSEN15P1-201ENST00000423257 515 ntBASIC16.23■□□□□ 0.19
LRRC38Q5VT99 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 RN7SL618P-201ENST00000477850 296 ntBASIC16.23■□□□□ 0.19
LRRC38Q5VT99 SDHAP3-202ENST00000515467 728 ntBASIC16.23■□□□□ 0.19
LRRC38Q5VT99 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 ZNF890P-202ENST00000530367 1156 ntBASIC16.23■□□□□ 0.19
LRRC38Q5VT99 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 AC051619.7-201ENST00000568314 623 ntBASIC16.23■□□□□ 0.19
LRRC38Q5VT99 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 AL596442.2-201ENST00000610240 980 ntBASIC16.23■□□□□ 0.19
LRRC38Q5VT99 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRC38Q5VT99 AC138969.3-201ENST00000546612 1459 ntBASIC16.22■□□□□ 0.19
LRRC38Q5VT99 AC138932.2-201ENST00000548268 1459 ntBASIC16.22■□□□□ 0.19
LRRC38Q5VT99 AC126755.4-201ENST00000549796 1459 ntBASIC16.22■□□□□ 0.19
LRRC38Q5VT99 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 TUBB3P1-201ENST00000405796 1332 ntBASIC16.22■□□□□ 0.19
LRRC38Q5VT99 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 CICP23-201ENST00000605013 2741 ntBASIC16.22■□□□□ 0.19
LRRC38Q5VT99 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 FAM8A3P-201ENST00000427218 844 ntBASIC16.22■□□□□ 0.19
LRRC38Q5VT99 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 KRT18P43-201ENST00000469825 1281 ntBASIC16.22■□□□□ 0.19
LRRC38Q5VT99 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC38Q5VT99 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms