Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHROOM1Q2M3G4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHROOM1Q2M3G4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHROOM1Q2M3G4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHROOM1Q2M3G4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 ACTBP8-201ENST00000403258 1108 ntBASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 AC091271.1-201ENST00000611877 1162 ntBASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHROOM1Q2M3G4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 MIR1247-201ENST00000408206 136 ntBASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 AC079316.1-201ENST00000548397 411 ntBASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 AL118558.3-201ENST00000607414 1079 ntBASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 AL158070.2-201ENST00000623713 1621 ntBASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 AC007787.1-201ENST00000588095 1583 ntBASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 AL133338.1-201ENST00000565695 1517 ntBASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHROOM1Q2M3G4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms