Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 AL513480.1-201ENST00000451731 511 ntBASIC14.91□□□□□ -0.02
CHRNB3Q05901 AC002347.1-201ENST00000569543 541 ntBASIC14.91□□□□□ -0.02
CHRNB3Q05901 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 AC004790.2-201ENST00000623588 572 ntBASIC14.91□□□□□ -0.02
CHRNB3Q05901 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB3Q05901 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB3Q05901 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB3Q05901 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB3Q05901 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB3Q05901 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB3Q05901 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.9□□□□□ -0.02
CHRNB3Q05901 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 AL078644.1-201ENST00000609881 752 ntBASIC14.9□□□□□ -0.02
CHRNB3Q05901 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 AC073439.1-201ENST00000624121 1774 ntBASIC14.9□□□□□ -0.02
CHRNB3Q05901 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB3Q05901 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CHRNB3Q05901 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.9□□□□□ -0.02
CHRNB3Q05901 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 AC023024.2-201ENST00000623561 1993 ntBASIC14.89□□□□□ -0.03
CHRNB3Q05901 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 MIR1233-2-201ENST00000408138 82 ntBASIC14.89□□□□□ -0.03
CHRNB3Q05901 MIR1233-1-201ENST00000408722 82 ntBASIC14.89□□□□□ -0.03
CHRNB3Q05901 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 AL645939.2-201ENST00000427340 991 ntBASIC14.89□□□□□ -0.03
CHRNB3Q05901 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 AC108073.2-201ENST00000464002 357 ntBASIC14.89□□□□□ -0.03
CHRNB3Q05901 AC108751.1-201ENST00000490852 363 ntBASIC14.89□□□□□ -0.03
CHRNB3Q05901 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 AC040169.1-201ENST00000565382 521 ntBASIC14.89□□□□□ -0.03
CHRNB3Q05901 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms