Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.97□□□□□ -0.17
EFNB1P98172 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.97□□□□□ -0.17
EFNB1P98172 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.97□□□□□ -0.17
EFNB1P98172 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.97□□□□□ -0.17
EFNB1P98172 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.97□□□□□ -0.17
EFNB1P98172 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.97□□□□□ -0.17
EFNB1P98172 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.97□□□□□ -0.17
EFNB1P98172 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.97□□□□□ -0.17
EFNB1P98172 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.97□□□□□ -0.17
EFNB1P98172 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.97□□□□□ -0.17
EFNB1P98172 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
EFNB1P98172 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.97□□□□□ -0.17
EFNB1P98172 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.97□□□□□ -0.17
EFNB1P98172 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.97□□□□□ -0.17
EFNB1P98172 AC005840.4-201ENST00000541242 2494 ntBASIC13.97□□□□□ -0.17
EFNB1P98172 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
EFNB1P98172 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.96□□□□□ -0.17
EFNB1P98172 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.96□□□□□ -0.17
EFNB1P98172 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.96□□□□□ -0.17
EFNB1P98172 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNB1P98172 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNB1P98172 NFIC-211ENST00000641145 8399 ntBASIC13.96□□□□□ -0.17
EFNB1P98172 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
EFNB1P98172 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
EFNB1P98172 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
EFNB1P98172 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
EFNB1P98172 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
EFNB1P98172 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.96□□□□□ -0.17
EFNB1P98172 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNB1P98172 SLC25A39P2-201ENST00000537614 270 ntBASIC13.96□□□□□ -0.17
EFNB1P98172 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.96□□□□□ -0.17
EFNB1P98172 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.96□□□□□ -0.17
EFNB1P98172 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.96□□□□□ -0.17
EFNB1P98172 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNB1P98172 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
EFNB1P98172 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNB1P98172 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNB1P98172 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
EFNB1P98172 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
EFNB1P98172 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
EFNB1P98172 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
EFNB1P98172 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
EFNB1P98172 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
EFNB1P98172 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
EFNB1P98172 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
EFNB1P98172 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
EFNB1P98172 AC104581.4-201ENST00000623126 3052 ntBASIC13.96□□□□□ -0.18
EFNB1P98172 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
EFNB1P98172 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.96□□□□□ -0.18
EFNB1P98172 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
EFNB1P98172 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.96□□□□□ -0.18
EFNB1P98172 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
EFNB1P98172 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
EFNB1P98172 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
EFNB1P98172 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.95□□□□□ -0.18
EFNB1P98172 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNB1P98172 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms