Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CBX1P83916 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CBX1P83916 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX1P83916 AC128676.1-201ENST00000454392 318 ntBASIC16.4■□□□□ 0.22
CBX1P83916 AC122714.2-201ENST00000502787 707 ntBASIC16.4■□□□□ 0.22
CBX1P83916 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.4■□□□□ 0.22
CBX1P83916 MIR4492-201ENST00000581627 80 ntBASIC16.4■□□□□ 0.22
CBX1P83916 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX1P83916 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CBX1P83916 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX1P83916 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX1P83916 AC131212.3-201ENST00000624087 4219 ntBASIC16.4■□□□□ 0.22
CBX1P83916 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
CBX1P83916 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX1P83916 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
CBX1P83916 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CBX1P83916 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.39■□□□□ 0.22
CBX1P83916 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX1P83916 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX1P83916 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CBX1P83916 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CBX1P83916 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX1P83916 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.39■□□□□ 0.21
CBX1P83916 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX1P83916 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.39■□□□□ 0.21
CBX1P83916 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.39■□□□□ 0.21
CBX1P83916 AP005242.2-201ENST00000580065 1175 ntBASIC16.39■□□□□ 0.21
CBX1P83916 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.39■□□□□ 0.21
CBX1P83916 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX1P83916 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.39■□□□□ 0.21
CBX1P83916 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
CBX1P83916 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX1P83916 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX1P83916 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CBX1P83916 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CBX1P83916 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX1P83916 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX1P83916 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX1P83916 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX1P83916 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX1P83916 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX1P83916 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX1P83916 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX1P83916 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.38■□□□□ 0.21
CBX1P83916 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX1P83916 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CBX1P83916 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.38■□□□□ 0.21
CBX1P83916 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CBX1P83916 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
CBX1P83916 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CBX1P83916 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CBX1P83916 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX1P83916 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX1P83916 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX1P83916 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms